Information for 9-CAGCAG (Motif 14)

A G U C C G U A A C U G A G U C C G U A A C U G
Reverse Opposite:
A G U C A C G U A C U G U G A C A C G U A C U G
p-value:1e-45
log p-value:-1.053e+02
Information Content per bp:1.909
Number of Target Sequences with motif4410.0
Percentage of Target Sequences with motif30.05%
Number of Background Sequences with motif8526.3
Percentage of Background Sequences with motif24.85%
Average Position of motif in Targets153.5 +/- 153.9bp
Average Position of motif in Background103.2 +/- 68.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.38
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

hsa-miR-93* MIMAT0004509 Homo sapiens miR-93* Targets (miRBase)

Match Rank:1
Score:0.78
Offset:-15
Orientation:forward strand
Alignment:---------------CAGCAG-
CGGGAAGTGCTAGCTCAGCAGT
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A G U C C G U A A C U G A G U C C G U A A C U G A C G U
A G U C A C U G A C U G A C U G C G U A C G U A A C U G A C G U A C U G A G U C A C G U C G U A A C U G A G U C A C G U A G U C C G U A A C U G A G U C C G U A A C U G A C G U

hsa-miR-370 MIMAT0000722 Homo sapiens miR-370 Targets (miRBase)

Match Rank:2
Score:0.78
Offset:-14
Orientation:forward strand
Alignment:--------------CAGCAG--
ACCAGGTTCCACCCCAGCAGGC
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A G U C C G U A A C U G A G U C C G U A A C U G A C G U A C G U
C G U A A G U C A G U C C G U A A C U G A C U G A C G U A C G U A G U C A G U C C G U A A G U C A G U C A G U C A G U C C G U A A C U G A G U C C G U A A C U G A C U G A G U C

hsa-miR-3692* MIMAT0018121 Homo sapiens miR-3692* Targets (miRBase)

Match Rank:3
Score:0.76
Offset:-17
Orientation:forward strand
Alignment:-----------------CAGCAG-
CAGTATCCACTCCTGACCAGCAGG
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A G U C C G U A A C U G A G U C C G U A A C U G A C G U
A G U C C G U A A C U G A C G U C G U A A C G U A G U C A G U C C G U A A G U C A C G U A G U C A G U C A C G U A C U G C G U A A G U C A G U C C G U A A C U G A G U C C G U A A C U G A C U G

hsa-miR-4456 MIMAT0018978 Homo sapiens miR-4456 Targets (miRBase)

Match Rank:4
Score:0.73
Offset:-10
Orientation:forward strand
Alignment:----------CAGCAG-
AAAAGGAAGCCACCAGG
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A G U C C G U A A C U G A G U C C G U A A C U G A C G U
C G U A C G U A C G U A C G U A A C U G A C U G C G U A C G U A A C U G A G U C A G U C C G U A A G U C A G U C C G U A A C U G A C U G

hsa-miR-4299 MIMAT0016851 Homo sapiens miR-4299 Targets (miRBase)

Match Rank:5
Score:0.72
Offset:-11
Orientation:forward strand
Alignment:-----------CAGCAG-
GCCTCTCATGTCACCAGC
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A G U C C G U A A C U G A G U C C G U A A C U G A C G U
A C U G A G U C A G U C A C G U A G U C A C G U A G U C C G U A A C G U A C U G A C G U A G U C C G U A A G U C A G U C C G U A A C U G A G U C

hsa-miR-4502 MIMAT0019038 Homo sapiens miR-4502 Targets (miRBase)

Match Rank:6
Score:0.71
Offset:-15
Orientation:forward strand
Alignment:---------------CAGCAG-
CTTCAGCACCATCATCATCAGC
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A G U C C G U A A C U G A G U C C G U A A C U G A C G U
A G U C A C G U A C G U A G U C C G U A A C U G A G U C C G U A A G U C A G U C C G U A A C G U A G U C C G U A A C G U A G U C C G U A A C G U A G U C C G U A A C U G A G U C

hsa-miR-548q MIMAT0011163 Homo sapiens miR-548q Targets (miRBase)

Match Rank:7
Score:0.70
Offset:-15
Orientation:forward strand
Alignment:---------------CAGCAG-
CCGCCATTACTTTTGCACCAGC
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A G U C C G U A A C U G A G U C C G U A A C U G A C G U
A G U C A G U C A C U G A G U C A G U C C G U A A C G U A C G U C G U A A G U C A C G U A C G U A C G U A C G U A C U G A G U C C G U A A G U C A G U C C G U A A C U G A G U C

hsa-miR-138 MIMAT0000430 Homo sapiens miR-138 Targets (miRBase)

Match Rank:8
Score:0.69
Offset:-15
Orientation:forward strand
Alignment:---------------CAGCAG--
CGGCCTGATTCACAACACCAGCT
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A G U C C G U A A C U G A G U C C G U A A C U G A C G U A C G U
A G U C A C U G A C U G A G U C A G U C A C G U A C U G C G U A A C G U A C G U A G U C C G U A A G U C C G U A C G U A A G U C C G U A A G U C A G U C C G U A A C U G A G U C A C G U

hsa-miR-4686 MIMAT0019773 Homo sapiens miR-4686 Targets (miRBase)

Match Rank:9
Score:0.68
Offset:-14
Orientation:forward strand
Alignment:--------------CAGCAG---
AACACCAGAAAGCCCAGCAGATA
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A G U C C G U A A C U G A G U C C G U A A C U G A C G U A C G U A C G U
C G U A C G U A A G U C C G U A A G U C A G U C C G U A A C U G C G U A C G U A C G U A A C U G A G U C A G U C A G U C C G U A A C U G A G U C C G U A A C U G C G U A A C G U C G U A

hsa-miR-1267 MIMAT0005921 Homo sapiens miR-1267 Targets (miRBase)

Match Rank:10
Score:0.67
Offset:-14
Orientation:forward strand
Alignment:--------------CAGCAG-
TGGGGATTACACTTCAACAGG
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A G U C C G U A A C U G A G U C C G U A A C U G A C G U
A C G U A C U G A C U G A C U G A C U G C G U A A C G U A C G U C G U A A G U C C G U A A G U C A C G U A C G U A G U C C G U A C G U A A G U C C G U A A C U G A C U G