Information for 3-AAAGTCTT (Motif 3)

U G C A U G C A C G U A U C A G G C A U A G U C A C G U A G C U
Reverse Opposite:
U C G A G U C A U C A G C G U A A G U C C G A U A C G U A C G U
p-value:1e-125
log p-value:-2.881e+02
Information Content per bp:1.776
Number of Target Sequences with motif2931.0
Percentage of Target Sequences with motif19.97%
Number of Background Sequences with motif4435.2
Percentage of Background Sequences with motif12.93%
Average Position of motif in Targets158.9 +/- 148.8bp
Average Position of motif in Background102.5 +/- 66.3bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

hsa-miR-4432 MIMAT0018948 Homo sapiens miR-4432 Targets (miRBase)

Match Rank:1
Score:0.72
Offset:-11
Orientation:forward strand
Alignment:-----------AAAGTCTT-
AGGCATCTTGCAGAGTCTTT
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U U G C A U G C A C G U A U C A G G C A U A G U C A C G U A G C U A C G U
C G U A A C U G A C U G A G U C C G U A A C G U A G U C A C G U A C G U A C U G A G U C C G U A A C U G C G U A A C U G A C G U A G U C A C G U A C G U A C G U

hsa-miR-499-5p MIMAT0002870 Homo sapiens miR-499-5p Targets (miRBase)

Match Rank:2
Score:0.72
Offset:-11
Orientation:forward strand
Alignment:-----------AAAGTCTT--
AAACATCACTGCAAGTCTTAA
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U U G C A U G C A C G U A U C A G G C A U A G U C A C G U A G C U A C G U A C G U
C G U A C G U A C G U A A G U C C G U A A C G U A G U C C G U A A G U C A C G U A C U G A G U C C G U A C G U A A C U G A C G U A G U C A C G U A C G U C G U A C G U A

hsa-miR-548u MIMAT0015013 Homo sapiens miR-548u Targets (miRBase)

Match Rank:3
Score:0.66
Offset:-13
Orientation:forward strand
Alignment:-------------AAAGTCTT--
CGCAAAAGTAATTGCAGTCTTTG
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U U G C A U G C A C G U A U C A G G C A U A G U C A C G U A G C U A C G U A C G U
A G U C A C U G A G U C C G U A C G U A C G U A C G U A A C U G A C G U C G U A C G U A A C G U A C G U A C U G A G U C C G U A A C U G A C G U A G U C A C G U A C G U A C G U A C U G

hsa-miR-499a-5p MIMAT0019897 Homo sapiens miR-499a-5p Targets (miRBase)

Match Rank:4
Score:0.65
Offset:-12
Orientation:forward strand
Alignment:------------AAAGTCTT-
TGAACATCACAGCAAGTCTGT
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U U G C A U G C A C G U A U C A G G C A U A G U C A C G U A G C U A C G U
A C G U A C U G C G U A C G U A A G U C C G U A A C G U A G U C C G U A A G U C C G U A A C U G A G U C C G U A C G U A A C U G A C G U A G U C A C G U A C U G A C G U

hsa-miR-1264 MIMAT0005791 Homo sapiens miR-1264 Targets (miRBase)

Match Rank:5
Score:0.63
Offset:-14
Orientation:forward strand
Alignment:--------------AAAGTCTT-
AACAGGTGCTCAAATAAGACTTG
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U U G C A U G C A C G U A U C A G G C A U A G U C A C G U A G C U A C G U
C G U A C G U A A G U C C G U A A C U G A C U G A C G U A C U G A G U C A C G U A G U C C G U A C G U A C G U A A C G U C G U A C G U A A C U G C G U A A G U C A C G U A C G U A C U G

hsa-miR-3617 MIMAT0017997 Homo sapiens miR-3617 Targets (miRBase)

Match Rank:6
Score:0.62
Offset:-13
Orientation:forward strand
Alignment:-------------AAAGTCTT-
CCCATCTTGCAACTATGTCTTT
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U U G C A U G C A C G U A U C A G G C A U A G U C A C G U A G C U A C G U
A G U C A G U C A G U C C G U A A C G U A G U C A C G U A C G U A C U G A G U C C G U A C G U A A G U C A C G U C G U A A C G U A C U G A C G U A G U C A C G U A C G U A C G U

hsa-miR-641 MIMAT0003311 Homo sapiens miR-641 Targets (miRBase)

Match Rank:7
Score:0.61
Offset:-15
Orientation:forward strand
Alignment:---------------AAAGTCTT-
GAGGTGACTCTATCCTATGTCTTT
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U U G C A U G C A C G U A U C A G G C A U A G U C A C G U A G C U A C G U
A C U G C G U A A C U G A C U G A C G U A C U G C G U A A G U C A C G U A G U C A C G U C G U A A C G U A G U C A G U C A C G U C G U A A C G U A C U G A C G U A G U C A C G U A C G U A C G U

hsa-miR-4771 MIMAT0019925 Homo sapiens miR-4771 Targets (miRBase)

Match Rank:8
Score:0.59
Offset:-11
Orientation:forward strand
Alignment:-----------AAAGTCTT--
TAATTGTAGGTCAAGTCTGCT
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U U G C A U G C A C G U A U C A G G C A U A G U C A C G U A G C U A C G U A C G U
A C G U C G U A C G U A A C G U A C G U A C U G A C G U C G U A A C U G A C U G A C G U A G U C C G U A C G U A A C U G A C G U A G U C A C G U A C U G A G U C A C G U

hsa-miR-548g MIMAT0005912 Homo sapiens miR-548g Targets (miRBase)

Match Rank:9
Score:0.59
Offset:-14
Orientation:forward strand
Alignment:--------------AAAGTCTT
GTACAAAAGTAATTACAGTTTT
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U U G C A U G C A C G U A U C A G G C A U A G U C A C G U A G C U
A C U G A C G U C G U A A G U C C G U A C G U A C G U A C G U A A C U G A C G U C G U A C G U A A C G U A C G U C G U A A G U C C G U A A C U G A C G U A C G U A C G U A C G U

hsa-miR-4499 MIMAT0019035 Homo sapiens miR-4499 Targets (miRBase)

Match Rank:10
Score:0.59
Offset:-9
Orientation:forward strand
Alignment:---------AAAGTCTT
TCCCTCCTCTCAGTCTT
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U U G C A U G C A C G U A U C A G G C A U A G U C A C G U A G C U
A C G U A G U C A G U C A G U C A C G U A G U C A G U C A C G U A G U C A C G U A G U C C G U A A C U G A C G U A G U C A C G U A C G U