Information for 20-GARCGCYT (Motif 33)

A C U G G U C A C U G A A U G C A C U G A G U C A G U C A G C U
Reverse Opposite:
U C G A U C A G U C A G U G A C A U C G A G C U C A G U U G A C
p-value:1e-23
log p-value:-5.508e+01
Information Content per bp:1.653
Number of Target Sequences with motif799.0
Percentage of Target Sequences with motif5.44%
Number of Background Sequences with motif1285.0
Percentage of Background Sequences with motif3.74%
Average Position of motif in Targets153.3 +/- 144.9bp
Average Position of motif in Background102.1 +/- 62.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

hsa-miR-518e MIMAT0002861 Homo sapiens miR-518e Targets (miRBase)

Match Rank:1
Score:0.66
Offset:-12
Orientation:forward strand
Alignment:------------GARCGCYT-
CACTCTGAAGGGAAGCGCTTT
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C U G G U C A C U G A A U G C A C U G A G U C A G U C A G C U A C G U
A G U C C G U A A G U C A C G U A G U C A C G U A C U G C G U A C G U A A C U G A C U G A C U G C G U A C G U A A C U G A G U C A C U G A G U C A C G U A C G U A C G U

hsa-miR-1245b-5p MIMAT0019950 Homo sapiens miR-1245b-5p Targets (miRBase)

Match Rank:2
Score:0.63
Offset:-12
Orientation:forward strand
Alignment:------------GARCGCYT-
TTTAAGTGATCTAAAGGCCTA
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C U G G U C A C U G A A U G C A C U G A G U C A G U C A G C U A C G U
A C G U A C G U A C G U C G U A C G U A A C U G A C G U A C U G C G U A A C G U A G U C A C G U C G U A C G U A C G U A A C U G A C U G A G U C A G U C A C G U C G U A

hsa-miR-518b MIMAT0002844 Homo sapiens miR-518b Targets (miRBase)

Match Rank:3
Score:0.63
Offset:-12
Orientation:forward strand
Alignment:------------GARCGCYT--
ACCTCTAAAGGGGAGCGCTTTG
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C U G G U C A C U G A A U G C A C U G A G U C A G U C A G C U A C G U A C G U
C G U A A G U C A G U C A C G U A G U C A C G U C G U A C G U A C G U A A C U G A C U G A C U G A C U G C G U A A C U G A G U C A C U G A G U C A C G U A C G U A C G U A C U G

hsa-miR-3142 MIMAT0015011 Homo sapiens miR-3142 Targets (miRBase)

Match Rank:4
Score:0.62
Offset:-13
Orientation:forward strand
Alignment:-------------GARCGCYT-
TCTGAAGGTTCAGAAAGGCCTT
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C U G G U C A C U G A A U G C A C U G A G U C A G U C A G C U A C G U
A C G U A G U C A C G U A C U G C G U A C G U A A C U G A C U G A C G U A C G U A G U C C G U A A C U G C G U A C G U A C G U A A C U G A C U G A G U C A G U C A C G U A C G U

hsa-miR-524-3p MIMAT0002850 Homo sapiens miR-524-3p Targets (miRBase)

Match Rank:5
Score:0.59
Offset:-11
Orientation:forward strand
Alignment:-----------GARCGCYT--
ACTCCAAAGGGAAGCGCCTTC
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C U G G U C A C U G A A U G C A C U G A G U C A G U C A G C U A C G U A C G U
C G U A A G U C A C G U A G U C A G U C C G U A C G U A C G U A A C U G A C U G A C U G C G U A C G U A A C U G A G U C A C U G A G U C A G U C A C G U A C G U A G U C

hsa-miR-451 MIMAT0001631 Homo sapiens miR-451 Targets (miRBase)

Match Rank:6
Score:0.59
Offset:-13
Orientation:forward strand
Alignment:-------------GARCGCYT-
AACTCAGTAATGGTAACGGTTT
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C U G G U C A C U G A A U G C A C U G A G U C A G U C A G C U A C G U
C G U A C G U A A G U C A C G U A G U C C G U A A C U G A C G U C G U A C G U A A C G U A C U G A C U G A C G U C G U A C G U A A G U C A C U G A C U G A C G U A C G U A C G U

hsa-miR-4297 MIMAT0016846 Homo sapiens miR-4297 Targets (miRBase)

Match Rank:7
Score:0.59
Offset:-9
Orientation:forward strand
Alignment:---------GARCGCYT
CACAGACAGGAAGGCA-
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C U G G U C A C U G A A U G C A C U G A G U C A G U C A G C U
A G U C C G U A A G U C C G U A A C U G C G U A A G U C C G U A A C U G A C U G C G U A C G U A A C U G A C U G A G U C C G U A A C G U

hsa-miR-525-3p MIMAT0002839 Homo sapiens miR-525-3p Targets (miRBase)

Match Rank:8
Score:0.59
Offset:-12
Orientation:forward strand
Alignment:------------GARCGCYT--
CGCTCTAAAGGGAAGCGCCTTC
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C U G G U C A C U G A A U G C A C U G A G U C A G U C A G C U A C G U A C G U
A G U C A C U G A G U C A C G U A G U C A C G U C G U A C G U A C G U A A C U G A C U G A C U G C G U A C G U A A C U G A G U C A C U G A G U C A G U C A C G U A C G U A G U C

hsa-miR-3614-3p MIMAT0017993 Homo sapiens miR-3614-3p Targets (miRBase)

Match Rank:9
Score:0.58
Offset:-15
Orientation:forward strand
Alignment:---------------GARCGCYT
AAAACACCAAGATCTGAAGGCTA
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C U G G U C A C U G A A U G C A C U G A G U C A G U C A G C U
C G U A C G U A C G U A C G U A A G U C C G U A A G U C A G U C C G U A C G U A A C U G C G U A A C G U A G U C A C G U A C U G C G U A C G U A A C U G A C U G A G U C A C G U C G U A

hsa-miR-1179 MIMAT0005824 Homo sapiens miR-1179 Targets (miRBase)

Match Rank:10
Score:0.57
Offset:-13
Orientation:forward strand
Alignment:-------------GARCGCYT
CCAACCAATGAAAGAATGCTT
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C U G G U C A C U G A A U G C A C U G A G U C A G U C A G C U
A G U C A G U C C G U A C G U A A G U C A G U C C G U A C G U A A C G U A C U G C G U A C G U A C G U A A C U G C G U A C G U A A C G U A C U G A G U C A C G U A C G U