Information for 4-RCGGAC (Motif 4)

C U G A G U A C A C U G A C U G G U C A A G U C
Reverse Opposite:
U C A G C A G U G U A C A G U C A C U G G A C U
p-value:1e-103
log p-value:-2.383e+02
Information Content per bp:1.666
Number of Target Sequences with motif3709.0
Percentage of Target Sequences with motif25.27%
Number of Background Sequences with motif6203.2
Percentage of Background Sequences with motif18.08%
Average Position of motif in Targets147.7 +/- 140.7bp
Average Position of motif in Background103.5 +/- 66.8bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.16
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

hsa-miR-4800-3p MIMAT0019979 Homo sapiens miR-4800-3p Targets (miRBase)

Match Rank:1
Score:0.68
Offset:-12
Orientation:forward strand
Alignment:------------RCGGAC-
GTGGACAGACGGACGGATG
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U C U G A G U A C A C U G A C U G G U C A A G U C A C G U
A C U G A C G U A C U G A C U G C G U A A G U C C G U A A C U G C G U A A G U C A C U G A C U G C G U A A G U C A C U G A C U G C G U A A C G U A C U G

hsa-miR-572 MIMAT0003237 Homo sapiens miR-572 Targets (miRBase)

Match Rank:2
Score:0.65
Offset:-14
Orientation:forward strand
Alignment:--------------RCGGAC
TGGGCCACCGCCGAGCGGAC
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U C U G A G U A C A C U G A C U G G U C A A G U C
A C G U A C U G A C U G A C U G A G U C A G U C C G U A A G U C A G U C A C U G A G U C A G U C A C U G C G U A A C U G A G U C A C U G A C U G C G U A A G U C

hsa-miR-3713 MIMAT0018164 Homo sapiens miR-3713 Targets (miRBase)

Match Rank:3
Score:0.64
Offset:-11
Orientation:forward strand
Alignment:-----------RCGGAC---
ACCATCCCCAAACGGATACC
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U C U G A G U A C A C U G A C U G G U C A A G U C A C G U A C G U A C G U
C G U A A G U C A G U C C G U A A C G U A G U C A G U C A G U C A G U C C G U A C G U A C G U A A G U C A C U G A C U G C G U A A C G U C G U A A G U C A G U C

hsa-miR-1468 MIMAT0006789 Homo sapiens miR-1468 Targets (miRBase)

Match Rank:4
Score:0.64
Offset:-15
Orientation:forward strand
Alignment:---------------RCGGAC
CAGCGAAACAGGCAAACGGAG
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U C U G A G U A C A C U G A C U G G U C A A G U C
A G U C C G U A A C U G A G U C A C U G C G U A C G U A C G U A A G U C C G U A A C U G A C U G A G U C C G U A C G U A C G U A A G U C A C U G A C U G C G U A A C U G

hsa-miR-4669 MIMAT0019749 Homo sapiens miR-4669 Targets (miRBase)

Match Rank:5
Score:0.63
Offset:-13
Orientation:forward strand
Alignment:-------------RCGGAC---
CCTCCTCCACTTCCCGGACACA
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U C U G A G U A C A C U G A C U G G U C A A G U C A C G U A C G U A C G U
A G U C A G U C A C G U A G U C A G U C A C G U A G U C A G U C C G U A A G U C A C G U A C G U A G U C A G U C A G U C A C U G A C U G C G U A A G U C C G U A A G U C C G U A

hsa-miR-937 MIMAT0004980 Homo sapiens miR-937 Targets (miRBase)

Match Rank:6
Score:0.62
Offset:-16
Orientation:forward strand
Alignment:----------------RCGGAC
GGCAGAGAGTCAGAGCGCGGAT
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U C U G A G U A C A C U G A C U G G U C A A G U C
A C U G A C U G A G U C C G U A A C U G C G U A A C U G C G U A A C U G A C G U A G U C C G U A A C U G C G U A A C U G A G U C A C U G A G U C A C U G A C U G C G U A A C G U

hsa-miR-4454 MIMAT0018976 Homo sapiens miR-4454 Targets (miRBase)

Match Rank:7
Score:0.61
Offset:-12
Orientation:forward strand
Alignment:------------RCGGAC--
TGGTGCCGTGACTCGGATCC
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U C U G A G U A C A C U G A C U G G U C A A G U C A C G U A C G U
A C G U A C U G A C U G A C G U A C U G A G U C A G U C A C U G A C G U A C U G C G U A A G U C A C G U A G U C A C U G A C U G C G U A A C G U A G U C A G U C

hsa-miR-3605-3p MIMAT0017982 Homo sapiens miR-3605-3p Targets (miRBase)

Match Rank:8
Score:0.61
Offset:-16
Orientation:forward strand
Alignment:----------------RCGGAC-
CTAGAGGACAGGTAACACGGAGG
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U C U G A G U A C A C U G A C U G G U C A A G U C A C G U
A G U C A C G U C G U A A C U G C G U A A C U G A C U G C G U A A G U C C G U A A C U G A C U G A C G U C G U A C G U A A G U C C G U A A G U C A C U G A C U G C G U A A C U G A C U G

hsa-miR-500b MIMAT0016925 Homo sapiens miR-500b Targets (miRBase)

Match Rank:9
Score:0.59
Offset:-11
Orientation:forward strand
Alignment:-----------RCGGAC-
ACCCAGGTAGCAAGGATT
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U C U G A G U A C A C U G A C U G G U C A A G U C A C G U
C G U A A G U C A G U C A G U C C G U A A C U G A C U G A C G U C G U A A C U G A G U C C G U A C G U A A C U G A C U G C G U A A C G U A C G U

hsa-miR-2355-3p MIMAT0017950 Homo sapiens miR-2355-3p Targets (miRBase)

Match Rank:10
Score:0.58
Offset:-13
Orientation:forward strand
Alignment:-------------RCGGAC---
ATCTCCAAACAGCAAGGACAAT
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U C U G A G U A C A C U G A C U G G U C A A G U C A C G U A C G U A C G U
C G U A A C G U A G U C A C G U A G U C A G U C C G U A C G U A C G U A A G U C C G U A A C U G A G U C C G U A C G U A A C U G A C U G C G U A A G U C C G U A C G U A A C G U