Information for 28-CTGCCTCA (Motif 44)

A G U C A C G U A C U G A G U C A G U C A C G U A G U C C G U A
Reverse Opposite:
A C G U A C U G C G U A A C U G A C U G A G U C C G U A A C U G
p-value:1e-10
log p-value:-2.388e+01
Information Content per bp:1.530
Number of Target Sequences with motif193.0
Percentage of Target Sequences with motif1.32%
Number of Background Sequences with motif273.0
Percentage of Background Sequences with motif0.80%
Average Position of motif in Targets148.4 +/- 150.5bp
Average Position of motif in Background105.1 +/- 61.2bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.55
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

hsa-miR-1827 MIMAT0006767 Homo sapiens miR-1827 Targets (miRBase)

Match Rank:1
Score:0.88
Offset:-10
Orientation:forward strand
Alignment:----------CTGCCTCA
ATTCAATCTACTGCCTCA
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A G U C A C G U A C U G A G U C A G U C A C G U A G U C C G U A
C G U A A C G U A C G U A G U C C G U A C G U A A C G U A G U C A C G U C G U A A G U C A C G U A C U G A G U C A G U C A C G U A G U C C G U A

hsa-miR-4419a MIMAT0018931 Homo sapiens miR-4419a Targets (miRBase)

Match Rank:2
Score:0.73
Offset:-9
Orientation:forward strand
Alignment:---------CTGCCTCA
TGCAGTCTCCTCCCTCA
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A G U C A C G U A C U G A G U C A G U C A C G U A G U C C G U A
A C G U A C U G A G U C C G U A A C U G A C G U A G U C A C G U A G U C A G U C A C G U A G U C A G U C A G U C A C G U A G U C C G U A

hsa-miR-4500 MIMAT0019036 Homo sapiens miR-4500 Targets (miRBase)

Match Rank:3
Score:0.73
Offset:-9
Orientation:forward strand
Alignment:---------CTGCCTCA
AAGAAACTACTACCTCA
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A G U C A C G U A C U G A G U C A G U C A C G U A G U C C G U A
C G U A C G U A A C U G C G U A C G U A C G U A A G U C A C G U C G U A A G U C A C G U C G U A A G U C A G U C A C G U A G U C C G U A

hsa-miR-650 MIMAT0003320 Homo sapiens miR-650 Targets (miRBase)

Match Rank:4
Score:0.71
Offset:-12
Orientation:forward strand
Alignment:------------CTGCCTCA-
GTCCTGAGAGCGCTGCCTCCT
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A G U C A C G U A C U G A G U C A G U C A C G U A G U C C G U A A C G U
A C U G A C G U A G U C A G U C A C G U A C U G C G U A A C U G C G U A A C U G A G U C A C U G A G U C A C G U A C U G A G U C A G U C A C G U A G U C A G U C A C G U

hsa-let-7g MIMAT0000414 Homo sapiens let-7g Targets (miRBase)

Match Rank:5
Score:0.70
Offset:-14
Orientation:forward strand
Alignment:--------------CTGCCTCA
AACTGTACAAACTACTACCTCA
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A G U C A C G U A C U G A G U C A G U C A C G U A G U C C G U A
C G U A C G U A A G U C A C G U A C U G A C G U C G U A A G U C C G U A C G U A C G U A A G U C A C G U C G U A A G U C A C G U C G U A A G U C A G U C A C G U A G U C C G U A

hsa-miR-98 MIMAT0000096 Homo sapiens miR-98 Targets (miRBase)

Match Rank:6
Score:0.70
Offset:-14
Orientation:forward strand
Alignment:--------------CTGCCTCA
AACAATACAACTTACTACCTCA
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A G U C A C G U A C U G A G U C A G U C A C G U A G U C C G U A
C G U A C G U A A G U C C G U A C G U A A C G U C G U A A G U C C G U A C G U A A G U C A C G U A C G U C G U A A G U C A C G U C G U A A G U C A G U C A C G U A G U C C G U A

hsa-let-7f MIMAT0000067 Homo sapiens let-7f Targets (miRBase)

Match Rank:7
Score:0.70
Offset:-14
Orientation:forward strand
Alignment:--------------CTGCCTCA
AACTATACAATCTACTACCTCA
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A G U C A C G U A C U G A G U C A G U C A C G U A G U C C G U A
C G U A C G U A A G U C A C G U C G U A A C G U C G U A A G U C C G U A C G U A A C G U A G U C A C G U C G U A A G U C A C G U C G U A A G U C A G U C A C G U A G U C C G U A

hsa-let-7b MIMAT0000063 Homo sapiens let-7b Targets (miRBase)

Match Rank:8
Score:0.70
Offset:-14
Orientation:forward strand
Alignment:--------------CTGCCTCA
AACCACACAACCTACTACCTCA
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A G U C A C G U A C U G A G U C A G U C A C G U A G U C C G U A
C G U A C G U A A G U C A G U C C G U A A G U C C G U A A G U C C G U A C G U A A G U C A G U C A C G U C G U A A G U C A C G U C G U A A G U C A G U C A C G U A G U C C G U A

hsa-let-7a MIMAT0000062 Homo sapiens let-7a Targets (miRBase)

Match Rank:9
Score:0.70
Offset:-14
Orientation:forward strand
Alignment:--------------CTGCCTCA
AACTATACAACCTACTACCTCA
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A G U C A C G U A C U G A G U C A G U C A C G U A G U C C G U A
C G U A C G U A A G U C A C G U C G U A A C G U C G U A A G U C C G U A C G U A A G U C A G U C A C G U C G U A A G U C A C G U C G U A A G U C A G U C A C G U A G U C C G U A

hsa-let-7c MIMAT0000064 Homo sapiens let-7c Targets (miRBase)

Match Rank:10
Score:0.70
Offset:-14
Orientation:forward strand
Alignment:--------------CTGCCTCA
AACCATACAACCTACTACCTCA
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A G U C A C G U A C U G A G U C A G U C A C G U A G U C C G U A
C G U A C G U A A G U C A G U C C G U A A C G U C G U A A G U C C G U A C G U A A G U C A G U C A C G U C G U A A G U C A C G U C G U A A G U C A G U C A C G U A G U C C G U A