Information for 29-AGGCAGGGGG (Motif 46)

C G U A A C U G A C U G A G U C C U G A A C U G A C U G A C U G A C U G A C U G
Reverse Opposite:
A G U C A G U C A G U C A G U C A G U C A G C U A C U G A G U C A G U C A C G U
p-value:1e-5
log p-value:-1.170e+01
Information Content per bp:1.976
Number of Target Sequences with motif25.0
Percentage of Target Sequences with motif0.17%
Number of Background Sequences with motif21.3
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets158.4 +/- 130.6bp
Average Position of motif in Background97.8 +/- 41.3bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)3.24
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

hsa-miR-4313 MIMAT0016865 Homo sapiens miR-4313 Targets (miRBase)

Match Rank:1
Score:0.68
Offset:-8
Orientation:forward strand
Alignment:--------AGGCAGGGGG--
GGGTTTGGGGCCAGGGGGCT
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U C G U A A C U G A C U G A G U C C U G A A C U G A C U G A C U G A C U G A C U G A C G U A C G U
A C U G A C U G A C U G A C G U A C G U A C G U A C U G A C U G A C U G A C U G A G U C A G U C C G U A A C U G A C U G A C U G A C U G A C U G A G U C A C G U

hsa-miR-4640-3p MIMAT0019700 Homo sapiens miR-4640-3p Targets (miRBase)

Match Rank:2
Score:0.67
Offset:-10
Orientation:forward strand
Alignment:----------AGGCAGGGGG--
GTGGGCCAGGAAACAGGGGGTG
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U C G U A A C U G A C U G A G U C C U G A A C U G A C U G A C U G A C U G A C U G A C G U A C G U
A C U G A C G U A C U G A C U G A C U G A G U C A G U C C G U A A C U G A C U G C G U A C G U A C G U A A G U C C G U A A C U G A C U G A C U G A C U G A C U G A C G U A C U G

hsa-miR-1976 MIMAT0009451 Homo sapiens miR-1976 Targets (miRBase)

Match Rank:3
Score:0.66
Offset:-10
Orientation:forward strand
Alignment:----------AGGCAGGGGG
ACAGCAAGGAGGGCAGGAGG
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U C G U A A C U G A C U G A G U C C U G A A C U G A C U G A C U G A C U G A C U G
C G U A A G U C C G U A A C U G A G U C C G U A C G U A A C U G A C U G C G U A A C U G A C U G A C U G A G U C C G U A A C U G A C U G C G U A A C U G A C U G

hsa-miR-3620 MIMAT0018001 Homo sapiens miR-3620 Targets (miRBase)

Match Rank:4
Score:0.65
Offset:-11
Orientation:forward strand
Alignment:-----------AGGCAGGGGG-
CTGGGTGCGGGATGCAGGGTGA
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U C G U A A C U G A C U G A G U C C U G A A C U G A C U G A C U G A C U G A C U G A C G U
A G U C A C G U A C U G A C U G A C U G A C G U A C U G A G U C A C U G A C U G A C U G C G U A A C G U A C U G A G U C C G U A A C U G A C U G A C U G A C G U A C U G C G U A

hsa-miR-3173-5p MIMAT0019214 Homo sapiens miR-3173-5p Targets (miRBase)

Match Rank:5
Score:0.65
Offset:-12
Orientation:forward strand
Alignment:------------AGGCAGGGGG
AAAGGAGAAAACAGGCAGGGCA
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U C G U A A C U G A C U G A G U C C U G A A C U G A C U G A C U G A C U G A C U G
C G U A C G U A C G U A A C U G A C U G C G U A A C U G C G U A C G U A C G U A C G U A A G U C C G U A A C U G A C U G A G U C C G U A A C U G A C U G A C U G A G U C C G U A

hsa-miR-4763-5p MIMAT0019912 Homo sapiens miR-4763-5p Targets (miRBase)

Match Rank:6
Score:0.61
Offset:-12
Orientation:forward strand
Alignment:------------AGGCAGGGGG
AGCAGGAGGGCTGGGCAGGCG-
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U C G U A A C U G A C U G A G U C C U G A A C U G A C U G A C U G A C U G A C U G
C G U A A C U G A G U C C G U A A C U G A C U G C G U A A C U G A C U G A C U G A G U C A C G U A C U G A C U G A C U G A G U C C G U A A C U G A C U G A G U C A C U G A C G U

hsa-miR-3943 MIMAT0018359 Homo sapiens miR-3943 Targets (miRBase)

Match Rank:7
Score:0.61
Offset:-10
Orientation:forward strand
Alignment:----------AGGCAGGGGG---
CGCCAAGTGAAGCCTGGGGGCTA
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U C G U A A C U G A C U G A G U C C U G A A C U G A C U G A C U G A C U G A C U G A C G U A C G U A C G U
A G U C A C U G A G U C A G U C C G U A C G U A A C U G A C G U A C U G C G U A C G U A A C U G A G U C A G U C A C G U A C U G A C U G A C U G A C U G A C U G A G U C A C G U C G U A

hsa-miR-1915* MIMAT0007891 Homo sapiens miR-1915* Targets (miRBase)

Match Rank:8
Score:0.61
Offset:-13
Orientation:forward strand
Alignment:-------------AGGCAGGGGG
GGCCCGGGCAGCAAGGCAAGGT-
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U C G U A A C U G A C U G A G U C C U G A A C U G A C U G A C U G A C U G A C U G
A C U G A C U G A G U C A G U C A G U C A C U G A C U G A C U G A G U C C G U A A C U G A G U C C G U A C G U A A C U G A C U G A G U C C G U A C G U A A C U G A C U G A C G U A C G U

hsa-miR-4685-3p MIMAT0019772 Homo sapiens miR-4685-3p Targets (miRBase)

Match Rank:9
Score:0.57
Offset:-11
Orientation:forward strand
Alignment:-----------AGGCAGGGGG-
CTAGCCAGGGCAGGAAGGGAGA
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U C G U A A C U G A C U G A G U C C U G A A C U G A C U G A C U G A C U G A C U G A C G U
A G U C A C G U C G U A A C U G A G U C A G U C C G U A A C U G A C U G A C U G A G U C C G U A A C U G A C U G C G U A C G U A A C U G A C U G A C U G C G U A A C U G C G U A

hsa-miR-4421 MIMAT0018934 Homo sapiens miR-4421 Targets (miRBase)

Match Rank:10
Score:0.57
Offset:-14
Orientation:forward strand
Alignment:--------------AGGCAGGGGG
TAGCTCCTTTCCACAGACAGGT--
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U C G U A A C U G A C U G A G U C C U G A A C U G A C U G A C U G A C U G A C U G
A C G U C G U A A C U G A G U C A C G U A G U C A G U C A C G U A C G U A C G U A G U C A G U C C G U A A G U C C G U A A C U G C G U A A G U C C G U A A C U G A C U G A C G U A C G U A C G U